CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Pc20g03510
(
Penicillium chrysogenum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
Pc20g03510
T57989_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pc20g03510.t1
RRM
4
71
SGLSWHTSDDTLREGFQQFGEIQEAIVVKDRATQRSRGFGFVRFATDAEADAALGAMNNQEFDGRVIR
Links
Other
RRM
family RBPs
Other
Penicillium chrysogenum
RBPs
12 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
MGYG_01973
Microsporum gypseum
MGYG_01973
N
0.789
TERG_04706
Trichophyton rubrum
TERG_04706
N
0.775
TESG_06069
Trichophyton tonsurans
TESG_06069
N
0.775
An02g12270
Aspergillus niger
CADANGAG00002750
N
0.746
MCYG_06115
Microsporum canis
MCYG_06115
N
0.746
PMAA_013050
Penicillium marneffei
PMAA_013050
N
0.732
ARB_03747
Arthroderma benhamiae
ARB_03747
N
0.730
e_gw1.00866.790.1
Aspergillus carbonarius
e_gw1.00866.790.1
N
0.725
ANIA_02989
Aspergillus nidulans
CADANIAG00010091
N
0.718
UREG_07630
Uncinocarpus reesii
UREG_07630
N
0.718
PABG_01590
Paracoccidioides brasiliensis
PABG_01590
N
0.704
BDBG_01954
Blastomyces dermatitidis
BDBG_01954
N
0.704