CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZYRO0G04004g
(
Zygosaccharomyces rouxii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ZYRO0G04004g
T59401_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ZYRO0G04004g
RRM
36
106
IFIGGLHKELTEADVLTVFSQYGVPVDLKLVRDRENGESRGFAYLKYEDQRSTVLAVDNLNGAIVAGRRIR
Links
Other
RRM
family RBPs
Other
Zygosaccharomyces rouxii
RBPs
8 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ADR017W
Ashbya gossypii
ADR017W
N
0.718
CAGL0J01914g
Candida glabrata
CAGL0J01914g
N
0.746
KLLA0D13420g
Kluyveromyces lactis
KLLA0D13420g
N
0.718
KLTH0F13442g
Kluyveromyces thermotolerans
KLTH0F13442g
N
0.789
Kwal_20972
Kluyveromyces waltii
Kwal_20972
N
0.831
SAKL0F04400g
Lachancea kluyveri
SAKL0F04400g
N
0.746
Skud_Contig843.2
Saccharomyces kudriavzevii
Skud_Contig843.2
N
0.704
A7TTU8_VANPO
Vanderwaltozyma polyspora
A7TTU8_VANPO
N
0.746