CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Kwal_20972
(
Kluyveromyces waltii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
Kwal_20972
T57139_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Kwal_20972
RRM
36
106
IFVGGLHKDLTEGDILTIFSQYGIPVDLKLVRDRESGESKGFAYLKYEDQRSTVLAVDNLNGVKIAGRSIR
Links
Other
RRM
family RBPs
Other
Kluyveromyces waltii
RBPs
17 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ZYRO0G04004g
Zygosaccharomyces rouxii
ZYRO0G04004g
N
0.831
SAKL0F04400g
Lachancea kluyveri
SAKL0F04400g
N
0.803
CAGL0J01914g
Candida glabrata
CAGL0J01914g
N
0.746
11273_YIR005W
Saccharomyces bayanus
11273_YIR005W
N
0.732
PABG_03870
Paracoccidioides brasiliensis
PABG_03870
N
0.732
A7TTU8_VANPO
Vanderwaltozyma polyspora
A7TTU8_VANPO
N
0.732
HCAG_00719
Histoplasma capsulatum
HCAG_00719
N
0.732
gw1.16.255.1
Trichoderma reesei
gw1.16.255.1
N
0.718
UREG_03685
Uncinocarpus reesii
UREG_03685
N
0.718
BDBG_01138
Blastomyces dermatitidis
BDBG_01138
N
0.718
KLTH0F13442g
Kluyveromyces thermotolerans
KLTH0F13442g
N
0.718
KLLA0D13420g
Kluyveromyces lactis
KLLA0D13420g
N
0.718
ADR017W
Ashbya gossypii
ADR017W
N
0.704
e_gw1.1.4685.1
Myceliophthora thermophila
e_gw1.1.4685.1
N
0.704
PHUM617480
Pediculus humanus
PHUM617480
N
0.704
Pa_1_22200
Podospora anserina
Pa_1_22200
N
0.704
e_gw1.1.5996.1
Thielavia terrestris
e_gw1.1.5996.1
N
0.704