CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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YTHDC2
(
Oryctolagus cuniculus
)
YTH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF04146 (YTH)
IPR007275
ENSOCUG00000012096
T62093_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000010414
YTH
1277
1366
LVFSVQGSGHFQGFSRMSSEIGREKSQDWGSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDGQELEPQVGEQLLQLWERL
Links
Other
YTH
family RBPs
Other
Oryctolagus cuniculus
RBPs
44 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSACAG00000000783
Anolis carolinensis
ENSACAG00000000783
I
0.000
Q3SYT9_BOVIN
Bos taurus
ENSBTAG00000020757
I
0.000
LOC100392590
Callithrix jacchus
ENSCJAG00000018590
I
0.000
ENSCJAG00000034075
Callithrix jacchus
ENSCJAG00000034075
I
0.000
PCBP2
Canis familiaris
ENSCAFG00000006821
I
0.000
ENSCPOG00000000967
Cavia porcellus
ENSCPOG00000000967
I
0.000
PCBP2
Dasypus novemcinctus
ENSDNOG00000008688
I
0.000
PCBP2
Equus caballus
ENSECAG00000022389
I
0.000
PCBP2
Gorilla gorilla
ENSGGOG00000012613
I
0.000
PCBP2
Homo sapiens
ENSG00000197111
D
0.000
ENSLAFG00000013187
Loxodonta africana
ENSLAFG00000013187
I
0.000
ENSLAFG00000025534
Loxodonta africana
ENSLAFG00000025534
I
0.000
PCBP2
Macaca mulatta
ENSMMUG00000006608
I
0.000
PCBP2
Microcebus murinus
ENSMICG00000011651
I
0.000
ENSMODG00000000280
Monodelphis domestica
ENSMODG00000000280
I
0.000
Pcbp2
Mus musculus
ENSMUSG00000056851
I
0.000
PCBP2
Ochotona princeps
ENSOPRG00000004680
I
0.000
ENSOCUG00000022490
Oryctolagus cuniculus
ENSOCUG00000022490
I
0.000
PCBP2
Pan troglodytes
ENSPTRG00000005018
I
0.000
ENSPPYG00000004581
Pongo pygmaeus
ENSPPYG00000004581
I
0.000
PCBP2
Procavia capensis
ENSPCAG00000005154
I
0.000
PCBP2
Pteropus vampyrus
ENSPVAG00000012284
I
0.000
PCBP2
Sus scrofa
ENSSSCG00000000274
I
0.000
PCBP3
Tetraodon nigroviridis
ENSTNIG00000008872
I
0.000
PCBP2
Tursiops truncatus
ENSTTRG00000017174
I
0.000