PCBP2 (Sus scrofa)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSSSCG00000000274 T19487_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		1.000
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.957
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.936
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.936
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.883
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000000288 KH 27 87
ENSSSCP00000000288 KH 111 174
ENSSSCP00000000288 KH 298 360
ENSSSCP00000000289 KH 76 138

Links

Other KH family RBPs
Other Sus scrofa RBPs

138 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCPOG00000000967 Cavia porcellus ENSCPOG00000000967 I 1.000
ENSACAG00000000783 Anolis carolinensis ENSACAG00000000783 I 1.000
Pcbp2 Mus musculus ENSMUSG00000056851 I 1.000
PCBP2 Dasypus novemcinctus ENSDNOG00000008688 I 1.000
PCBP2 Tursiops truncatus ENSTTRG00000017174 I 1.000
PCBP2 Pteropus vampyrus ENSPVAG00000012284 I 1.000
PCBP2 Pan troglodytes ENSPTRG00000005018 I 1.000
Q3SYT9_BOVIN Bos taurus ENSBTAG00000020757 I 1.000
PCBP2 Canis familiaris ENSCAFG00000006821 I 1.000
ENSPPYG00000004581 Pongo pygmaeus ENSPPYG00000004581 I 1.000
PCBP2 Equus caballus ENSECAG00000022389 I 1.000
PCBP2 Procavia capensis ENSPCAG00000005154 I 1.000
ENSOCUG00000022490 Oryctolagus cuniculus ENSOCUG00000022490 I 1.000
PCBP2 Macaca mulatta ENSMMUG00000006608 I 1.000
ENSMODG00000000280 Monodelphis domestica ENSMODG00000000280 I 1.000
ENSLAFG00000013187 Loxodonta africana ENSLAFG00000013187 I 1.000
PCBP2 Microcebus murinus ENSMICG00000011651 I 1.000
PCBP2 Ochotona princeps ENSOPRG00000004680 I 1.000
PCBP2 Gorilla gorilla ENSGGOG00000012613 I 1.000
PCBP2 Homo sapiens ENSG00000197111 D 1.000
ENSCJAG00000034075 Callithrix jacchus ENSCJAG00000034075 I 0.995
LOC100392590 Callithrix jacchus ENSCJAG00000018590 I 0.989
ENSMODG00000017748 Monodelphis domestica ENSMODG00000017748 I 0.984
CAB50743 Xenopus laevis CAB50743 I 0.984
CAD29864 Xenopus laevis CAD29864 I 0.984
AAH84195 Xenopus laevis AAH84195 I 0.984
AAH41241 Xenopus laevis AAH41241 I 0.984
pcbp3 Xenopus tropicalis ENSXETG00000012658 I 0.984
ENSORLG00000005176 Oryzias latipes ENSORLG00000005176 I 0.957
pcbp2 Danio rerio ENSDARG00000013184 D 0.957
ENSTRUG00000009361 Takifugu rubripes ENSTRUG00000009361 I 0.957
PCBP2 Tarsius syrichta ENSTSYG00000009771 I 0.952
ENSORLG00000012872 Oryzias latipes ENSORLG00000012872 I 0.952
PCBP1 Tetraodon nigroviridis ENSTNIG00000012585 I 0.952
ENSGACG00000006681 Gasterosteus aculeatus ENSGACG00000006681 I 0.947
PCBP1 Cavia porcellus ENSCPOG00000013511 I 0.936
PCBP1_RABIT Oryctolagus cuniculus ENSOCUG00000003634 I 0.936
LOC100050579 Equus caballus ENSECAG00000002544 I 0.936
Pcbp1 Rattus norvegicus ENSRNOG00000017708 I 0.936
PCBP1 Gorilla gorilla ENSGGOG00000028130 I 0.936
ENSGACG00000003197 Gasterosteus aculeatus ENSGACG00000003197 I 0.936
PCBP1 Myotis lucifugus ENSMLUG00000014173 I 0.936
PCBP1 Homo sapiens ENSG00000169564 D 0.936
ENSTRUG00000011419 Takifugu rubripes ENSTRUG00000011419 I 0.936
PCBP1_BOVIN Bos taurus ENSBTAG00000008985 I 0.936
ENSPPYG00000012328 Pongo pygmaeus ENSPPYG00000012328 I 0.936
Ame_R002707 Ailuropoda melanoleuca Ame_R002707 I 0.936
Pcbp1 Mus musculus ENSMUSG00000051695 D 0.936
PCBP1 Pan troglodytes ENSPTRG00000012025 I 0.936
LOC100409398 Callithrix jacchus ENSCJAG00000007694 I 0.931
XR_030450.1 Monodelphis domestica ENSMODG00000016543 N 0.921
PCBP1 Tupaia belangeri ENSTBEG00000015706 N 0.921
PCBP1 Tarsius syrichta ENSTSYG00000011282 N 0.921
A6MKZ3_CALJA Callithrix jacchus ENSCJAG00000022539 I 0.920
PCBP2 Macropus eugenii ENSMEUG00000001887 I 0.910
PCBP1 Canis familiaris ENSCAFG00000013845 I 0.910
Ame_R011627 Ailuropoda melanoleuca Ame_R011627 I 0.899
PCBP1 Callithrix jacchus ENSCJAG00000004017 I 0.899
PCBP3-2 Taeniopygia guttata ENSTGUG00000008158 I 0.888
PCBP3 Gallus gallus ENSGALG00000013155 I 0.888
PCBP2 Echinops telfairi ENSETEG00000014741 I 0.887
Pcbp3 Rattus norvegicus ENSRNOG00000001245 I 0.883
Pcbp3 Mus musculus ENSMUSG00000001120 D 0.883
ENSACAG00000009819 Anolis carolinensis ENSACAG00000009819 I 0.883
PCBP3 Pan troglodytes ENSPTRG00000014010 I 0.883
PCBP3 Gorilla gorilla ENSGGOG00000003683 I 0.883
PCBP3 Cavia porcellus ENSCPOG00000003648 I 0.883
LOC100050101 Equus caballus ENSECAG00000012413 I 0.883
PCBP3 Macaca mulatta ENSMMUG00000003825 I 0.883
LOC100408015 Callithrix jacchus ENSCJAG00000001903 I 0.883
PCBP3 Meleagris gallopavo ENSMGAG00000001883 I 0.883
PCBP3 Homo sapiens ENSG00000183570 I 0.883
PCBP3 Oryctolagus cuniculus ENSOCUG00000002696 I 0.883
PCBP3 Anolis carolinensis ENSACAG00000004607 I 0.883
PCBP3 Tursiops truncatus ENSTTRG00000015075 I 0.883
D4ADH2_RAT Rattus norvegicus ENSRNOG00000039295 I 0.878
ENSRNOG00000019487 Rattus norvegicus ENSRNOG00000019487 I 0.873
ENSMGAG00000005386 Meleagris gallopavo ENSMGAG00000005386 N 0.873
PCBP3 Gasterosteus aculeatus ENSGACG00000002266 I 0.872
PCBP3 Takifugu rubripes ENSTRUG00000006280 I 0.872
PCBP3 Takifugu rubripes ENSTRUG00000013604 I 0.872
PCBP3 Tetraodon nigroviridis ENSTNIG00000010615 I 0.872
Q17QV0_BOVIN Bos taurus ENSBTAG00000030775 I 0.872
PCBP3 Gasterosteus aculeatus ENSGACG00000014955 I 0.872
PCBP2 Myotis lucifugus ENSMLUG00000009971 I 0.856
PCBP3 Gallus gallus ENSGALG00000004394 I 0.846
PCBP3 Oryzias latipes ENSORLG00000000059 I 0.841
ENSOCUG00000025545 Oryctolagus cuniculus ENSOCUG00000025545 N 0.841
ENSMGAG00000006794 Meleagris gallopavo ENSMGAG00000006794 I 0.840
PCBP3 Macropus eugenii ENSMEUG00000012960 I 0.840
PCBP3 Ochotona princeps ENSOPRG00000003431 I 0.832
PCBP2 Tupaia belangeri ENSTBEG00000015592 I 0.814
PCBP1 Taeniopygia guttata ENSTGUG00000016232 I 0.814
PCBP3 Loxodonta africana ENSLAFG00000020835 I 0.803
ENSORLG00000014385 Oryzias latipes ENSORLG00000014385 I 0.798
D4A8D6_RAT Rattus norvegicus ENSRNOG00000006713 I 0.797
PCBP1 Macaca mulatta ENSMMUG00000013756 N 0.794
Ame_R007160 Ailuropoda melanoleuca Ame_R007160 I 0.793
pcbp3 Danio rerio ENSDARG00000054378 I 0.787
PCBP3 Microcebus murinus ENSMICG00000012679 I 0.787
ENSLAFG00000025534 Loxodonta africana ENSLAFG00000025534 I 0.783
PCBP3 Otolemur garnettii ENSOGAG00000008044 I 0.782
ENSMODG00000020653 Monodelphis domestica ENSMODG00000020653 I 0.767
PCBP1 Otolemur garnettii ENSOGAG00000008557 I 0.762
ENSGACG00000003044 Gasterosteus aculeatus ENSGACG00000003044 I 0.758
PCBP4 Takifugu rubripes ENSTRUG00000007426 I 0.751
PCBP3 Felis catus ENSFCAG00000014812 I 0.750
PCBP3 Myotis lucifugus ENSMLUG00000003074 I 0.750
ENSOCUG00000021452 Oryctolagus cuniculus ENSOCUG00000021452 I 0.749
ENSTRUG00000017789 Takifugu rubripes ENSTRUG00000017789 I 0.747
PCBP4 Gasterosteus aculeatus ENSGACG00000002664 I 0.746
PCBP4 Tetraodon nigroviridis ENSTNIG00000017887 I 0.746
PCBP3 Pteropus vampyrus ENSPVAG00000000832 I 0.734
estExt_gwp.C_3950051 Branchiostoma floridae estExt_gwp.C_3950051 I 0.730
fgenesh2_pg.scaffold_166000022 Branchiostoma floridae fgenesh2_pg.scaffold_166000022 I 0.730
PCBP4 Ornithorhynchus anatinus ENSOANG00000014110 I 0.726
PCBP4 Anolis carolinensis ENSACAG00000011701 I 0.721
PCBP4 Canis familiaris ENSCAFG00000010019 I 0.716
ENSPPYG00000013822 Pongo pygmaeus ENSPPYG00000013822 I 0.716
PCBP4 Pan troglodytes ENSPTRG00000014983 I 0.716
PCBP4_BOVIN Bos taurus ENSBTAG00000018622 I 0.716
A6MK33_CALJA Callithrix jacchus ENSCJAG00000005783 I 0.716
PCBP4 Homo sapiens ENSG00000090097 I 0.716
PCBP4 Macaca mulatta ENSMMUG00000022205 I 0.716
Pcbp4 Mus musculus ENSMUSG00000023495 I 0.716
PCBP4 Oryctolagus cuniculus ENSOCUG00000025336 I 0.716
PCBP4 Gorilla gorilla ENSGGOG00000012474 I 0.716
LOC100060660 Equus caballus ENSECAG00000024218 I 0.716
Pcbp4 Rattus norvegicus ENSRNOG00000012406 I 0.716
PCBP4 Felis catus ENSFCAG00000009148 N 0.714
ENSMGAG00000003895 Meleagris gallopavo ENSMGAG00000003895 N 0.714
PCBP3 Tetraodon nigroviridis ENSTNIG00000008872 I 0.711
PCBP4 Cavia porcellus ENSCPOG00000014617 I 0.711
PCBP1 Microcebus murinus ENSMICG00000002140 I 0.709
Pcbp2 Dipodomys ordii ENSDORG00000001384 I 0.707
ENSRNOG00000012044 Rattus norvegicus ENSRNOG00000012044 I 0.707
PCBP4 Taeniopygia guttata ENSTGUG00000006393 I 0.705
ENSOCUG00000025394 Oryctolagus cuniculus ENSOCUG00000025394 I 0.704