YTHDC1 (Taeniopygia guttata)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 ENSTGUG00000004452 T62145_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
YTHDC1
M354_0.6 		Homo sapiens KVVURC SELEX
Cook et al.(2011)
969_20167602 		0.979
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTGUP00000004609 YTH 376 472

Links

Other YTH family RBPs
Other Taeniopygia guttata RBPs

47 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BRADI3G01450 Brachypodium distachyon BRADI3G01450 N 0.000
LOC_Os02g02390 Oryza sativa LOC_Os02g02390 N 0.000
SB04G001123 Sorghum bicolor Sb04g001123 N 0.000