nar (Danio rerio)
CCCH ZF,CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00098 (zf-CCHC) 		IPR000571
IPR001878 		ENSDARG00000020217 T00055_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000007713 CCCH ZF 63 88
ENSDARP00000007713 CCCH ZF 91 116
ENSDARP00000007713 CCCH ZF 119 140
ENSDARP00000007713 CCCH ZF 143 168
ENSDARP00000007713 CCHC ZF 245 262

Links

Other CCCH ZF,CCHC ZF family RBPs
Other Danio rerio RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CPSF4 Gasterosteus aculeatus ENSGACG00000007792 N 0.992
CPSF4 Pteropus vampyrus ENSPVAG00000007531 N 0.975
CPSF4 Homo sapiens ENSG00000160917 N 0.975
CPSF4 Procavia capensis ENSPCAG00000001892 N 0.975
CPSF4 Taeniopygia guttata ENSTGUG00000007552 N 0.966
CPSF4 Tarsius syrichta ENSTSYG00000005712 N 0.932
ENSTSYG00000014604 Tarsius syrichta ENSTSYG00000014604 N 0.856
CPSF4L Ornithorhynchus anatinus ENSOANG00000009568 N 0.746