CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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BRADI3G45902
(
Brachypodium distachyon
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
BRADI3G45902
T02002_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI3G45902.1
CCCH ZF
21
49
WKAAICGEYMRSRFKTCSHGVACNFIHCF
Links
Other
CCCH ZF
family RBPs
Other
Brachypodium distachyon
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
SB04G022810
Sorghum bicolor
Sb04g022810
N
0.931
PDK_20s1394652g002
Phoenix dactylifera
PDK_20s1394652g002
N
0.862