CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
DDB_G0292410
(
Dictyostelium discoideum
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
DDB_G0292410
T02214_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
DDB0237482
CCCH ZF
96
122
PKSIVCEYFKQGVTCPKGNRCKFAHDL
Links
Other
CCCH ZF
family RBPs
Other
Dictyostelium discoideum
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
EFA82915.1
Polysphondylium pallidum
EFA82915.1
N
0.741
SPRG_03683
Saprolegnia parasitica
SPRG_03683
N
0.741
XP_002158150.1
Hydra magnipapillata
XP_002158150.1
N
0.704