CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
CPSF4L
(
Felis catus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSFCAG00000004745
T02606_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFCAP00000004386
CCCH ZF
1
23
MVVCKHWLRGLCKKGDQCNFLHQ
ENSFCAP00000004386
CCCH ZF
27
52
TRMPECYFYSKFGDCNNKECPFLHVK
ENSFCAP00000004386
CCCH ZF
55
76
FKTRDCPWYDQGFCKDAGSLCK
ENSFCAP00000004386
CCCH ZF
82
102
KIMCAKYFVGFCPEGPRCQFA
Links
Other
CCCH ZF
family RBPs
Other
Felis catus
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R014798
Ailuropoda melanoleuca
Ame_R014798
N
0.880
CPSF4L
Tursiops truncatus
ENSTTRG00000005243
N
0.812
ENSPPYG00000008589
Pongo pygmaeus
ENSPPYG00000008589
N
0.810
CPSF4L
Pan troglodytes
ENSPTRG00000009598
N
0.800
CPSF4L
Homo sapiens
ENSG00000187959
N
0.800
CPSF4L
Ochotona princeps
ENSOPRG00000007484
N
0.765
CPSF4L
Pteropus vampyrus
ENSPVAG00000006736
N
0.720