CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MKRN2
(
Monodelphis domestica
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSMODG00000006280
T02951_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMODP00000007792
CCCH ZF
120
144
EQQLCPYAAAGECHFGDACVYLHGD
ENSMODP00000007792
CCCH ZF
276
302
GKKACKYFEQGKGTCPFGGKCLYLHAY
Links
Other
CCCH ZF
family RBPs
Other
Monodelphis domestica
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
MKRN2
Macropus eugenii
ENSMEUG00000004347
N
1.000
MKRN2
Dasypus novemcinctus
ENSDNOG00000017476
N
0.906
MKRN2
Homo sapiens
ENSG00000075975
N
0.904
MKRN2
Meleagris gallopavo
ENSMGAG00000005057
N
0.868
MKRN2
Microcebus murinus
ENSMICG00000012164
N
0.830
MKRN2
Otolemur garnettii
ENSOGAG00000003255
N
0.830