CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSPPYG00000018935
(
Pongo pygmaeus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSPPYG00000018935
T03226_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPPYP00000021240
CCCH ZF
668
694
KRKEYCMYYNRFGRCNRGERCPYIHDP
ENSPPYP00000021240
CCCH ZF
724
748
EKMPVCSYFLKGICSNSNCPYSHVY
ENSPPYP00000021240
CCCH ZF
751
775
RKAEVCSDFLKGYCPLGAKCKKKHT
ENSPPYP00000021240
CCCH ZF
773
798
KHTLLCPDFARRGACPRGAQCQLLHR
Links
Other
CCCH ZF
family RBPs
Other
Pongo pygmaeus
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ZC3H3
Homo sapiens
ENSG00000014164
N
1.000
ZC3H3
Macaca mulatta
ENSMMUG00000019255
N
1.000
ZC3H3
Pan troglodytes
ENSPTRG00000020655
N
1.000
ZC3H3
Callithrix jacchus
ENSCJAG00000021439
N
0.961
ZC3H3
Spermophilus tridecemlineatus
ENSSTOG00000004358
N
0.952
Gm7353
Mus musculus
ENSMUSG00000055452
N
0.933
Zc3h3
Mus musculus
ENSMUSG00000075600
N
0.933
ZC3H3
Pteropus vampyrus
ENSPVAG00000005979
N
0.933
Zc3h3
Rattus norvegicus
ENSRNOG00000007684
N
0.923
LOC100065889
Equus caballus
ENSECAG00000012556
N
0.894
ZC3H3
Bos taurus
ENSBTAG00000021472
N
0.875