CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CG10463
(
Drosophila melanogaster
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
FBgn0032819
T03671_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0080828
CCCH ZF
110
131
GPECYVYTTKGYCARGVSCRFA
Links
Other
CCCH ZF
family RBPs
Other
Drosophila melanogaster
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GD24232
Drosophila simulans
FBgn0195581
N
1.000
GH13829
Drosophila grimshawi
FBgn0121305
N
0.818
GJ13589
Drosophila virilis
FBgn0200811
N
0.727