CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GD11258
(
Drosophila simulans
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
FBgn0183008
T03776_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0209660
CCCH ZF
73
99
DRLEVCREFLRGACKRAESECRFAHPQ
Links
Other
CCCH ZF
family RBPs
Other
Drosophila simulans
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GI18620
Drosophila mojavensis
FBgn0141359
N
1.000
AAEL001527
Aedes aegypti
AAEL001527
N
0.963
BGIBMGA005962
Bombyx mori
BGIBMGA005962
N
0.889
Q8CIQ0_RAT
Rattus norvegicus
ENSRNOG00000014076
N
0.704