CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ISCW001632
(
Ixodes scapularis
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ISCW001632
T03911_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ISCW001632-PA
CCCH ZF
170
196
PSMKPCSFFLEGHCKFSAERCRFSHGH
Links
Other
CCCH ZF
family RBPs
Other
Ixodes scapularis
RBPs
1 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ZGPAT_BOVIN
Bos taurus
ENSBTAG00000007498
N
0.704