B9I6N1_POPTR (Populus trichocarpa)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 POPTR_0013s00620 T04064_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0013s00620.1 CCCH ZF 60 83

Links

Other CCCH ZF family RBPs
Other Populus trichocarpa RBPs

5 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
30128.m008963 Ricinus communis 30128.m008963 N 0.840
ppa016420m Prunus persica ppa016420m N 0.800
MDP0000145898 Malus x domestica MDP0000145898 N 0.731
PK09048.1 Cannabis sativa PK09048.1 N 0.731
GSVIVG00031300001 Vitis vinifera GSVIVG00031300001 N 0.704