CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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LinJ30_V3.2210
(
Leishmania infantum
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
LinJ30_V3.2210
T04314_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
LinJ30_V3.2210
CCCH ZF
39
65
LKTKACRYFLLGVTCPFGDSCAFSHSE
Links
Other
CCCH ZF
family RBPs
Other
Leishmania infantum
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LmjF30.2200
Leishmania major
LmjF30.2200
N
1.000
LmxM29.2200
Leishmania mexicana
LmxM29.2200
N
1.000
LbrM30_V2.2150
Leishmania braziliensis
LbrM30_V2.2150
N
0.963