CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PBANKA_132760
(
Plasmodium berghei
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
PBANKA_132760
T04407_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PBANKA_132760
CCCH ZF
69
95
KKKDICKFFFKKGKCIHNEKCNYSHDV
PBANKA_132760
CCCH ZF
102
124
SKLCKFLIKGNCHKDNCMFSHDY
Links
Other
CCCH ZF
family RBPs
Other
Plasmodium berghei
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PY04485
Plasmodium yoelii
PY04485
N
0.920
PKH_124140
Plasmodium knowlesi
PKH_124140
N
0.800
PVX_117255
Plasmodium vivax
PVX_117255
N
0.780