fgenesh1_pg.C_scaffold_9000149 (Phytophthora ramorum)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 fgenesh1_pg.C_scaffold_9000149 T05247_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_9000149 CCCH ZF 71 96
fgenesh1_pg.C_scaffold_9000149 CCCH ZF 117 135
fgenesh1_pg.C_scaffold_9000149 CCCH ZF 269 294

Links

Other CCCH ZF family RBPs
Other Phytophthora ramorum RBPs

3 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
s_466373 Phytophthora sojae s_466373 N 0.958
gw1.9.400.1 Phytophthora capsici gw1.9.400.1 N 0.917
PITG_12235 Phytophthora infestans PITG_12235 N 0.903