CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GSPATP00007856001
(
Paramecium tetraurelia
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
GSPATP00007856001
T06177_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSPATP00007856001
CCCH ZF
484
510
YKTKHCHNFHSPIGCARGDNCNFIHDS
Links
Other
CCCH ZF
family RBPs
Other
Paramecium tetraurelia
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GSPATP00008012001
Paramecium tetraurelia
GSPATP00008012001
N
0.963
GSPATP00035986001
Paramecium tetraurelia
GSPATP00035986001
N
0.926
GSPATP00005730001
Paramecium tetraurelia
GSPATP00005730001
N
0.889