PGTG_00318 (Puccinia graminis)
CCHC ZF,KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00013 (KH_1) 		IPR001878
IPR018111 		PGTG_00318 T06949_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PGTT_00318 KH 186 257
PGTT_00318 CCHC ZF 295 312
PGTT_00318 CCHC ZF 320 337

Links

Other CCHC ZF,KH family RBPs
Other Puccinia graminis RBPs

13 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PTTG_08570 Puccinia triticina PTTG_08570 N 0.991
estExt_Genewise1Plus.C_11035 Sporobolomyces roseus estExt_Genewise1Plus.C_11035 N 0.815
estExt_fgenesh3_pm.C_200020 Postia placenta estExt_fgenesh3_pm.C_200020 N 0.771
estExt_fgenesh3_pm.C_870007 Postia placenta estExt_fgenesh3_pm.C_870007 N 0.771
estExt_fgenesh1_pm.C_50279 Schizophyllum commune estExt_fgenesh1_pm.C_50279 N 0.769
CC1G_06433 Coprinopsis cinerea CC1G_06433 N 0.752
e_gww2.7.165.1 Phanerochaete chrysosporium e_gww2.7.165.1 N 0.743
estExt_Genewise1.C_110391 Heterobasidion annosum estExt_Genewise1.C_110391 N 0.743
CNBG_0731 Cryptococcus neoformans CNBG_0731 N 0.741
gww1.11.161.1 Laccaria bicolor gww1.11.161.1 N 0.741
estExt_fgenesh1_pm.C_80273 Pleurotus ostreatus estExt_fgenesh1_pm.C_80273 N 0.734
estExt_fgenesh2_pm.C_30298 Agaricus bisporus estExt_fgenesh2_pm.C_30298 N 0.734
estExt_fgenesh2_pm.C_70506 Serpula lacrymans estExt_fgenesh2_pm.C_70506 N 0.734