B9IPK2_POPTR (Populus trichocarpa)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		POPTR_0019s07730 T07421_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0019s07730.1 RRM 6 41
POPTR_0019s07730.1 CCHC ZF 69 86
POPTR_0019s07730.2 RRM 6 41
POPTR_0019s07730.2 CCHC ZF 69 86
POPTR_0019s07730.3 RRM 6 41
POPTR_0019s07730.3 CCHC ZF 69 86
POPTR_0019s07730.4 RRM 6 41
POPTR_0019s07730.4 CCHC ZF 69 86

Links

Other CCHC ZF,RRM family RBPs
Other Populus trichocarpa RBPs

2 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GRMZM2G070239 Zea mays GRMZM2G070239 N 0.745