GRMZM2G161242 (Zea mays)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		GRMZM2G161242 T07613_0.6 MaizeSequence (2009-Oct-16)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G161242_P01 RRM 9 79
GRMZM2G161242_P01 CCHC ZF 114 131
GRMZM2G161242_P02 RRM 1 41
GRMZM2G161242_P02 CCHC ZF 76 93

Links

Other CCHC ZF,RRM family RBPs
Other Zea mays RBPs

5 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Sb01g011910 Sorghum bicolor Sb01g011910 N 0.944
GRMZM2G083783 Zea mays GRMZM2G083783 N 0.921
LOC_Os03g47800 Oryza sativa LOC_Os03g47800 N 0.831
BGIOSIBCE012515 Oryza indica BGIOSIBCE012515 N 0.831
BRADI1G12460 Brachypodium distachyon BRADI1G12460 N 0.798