CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CpipJ_CPIJ015349
(
Culex pipiens
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
CpipJ_CPIJ015349
T07986_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CpipJ_CPIJ015349-RA
CCHC ZF
53
70
NRCFFCKQEGHVKSNCPK
Links
Other
CCHC ZF
family RBPs
Other
Culex pipiens
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CPIJ015349
Culex quinquefasciatus
CPIJ015349
N
1.000
CpipJ_CPIJ014538
Culex pipiens
CpipJ_CPIJ014538
N
0.833
CpipJ_CPIJ007614
Culex pipiens
CpipJ_CPIJ007614
N
0.833
CpipJ_CPIJ006994
Culex pipiens
CpipJ_CPIJ006994
N
0.833
CpipJ_CPIJ009564
Culex pipiens
CpipJ_CPIJ009564
N
0.778
CpipJ_CPIJ009289
Culex pipiens
CpipJ_CPIJ009289
N
0.778