CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
PGTG_14786
(
Puccinia graminis
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
PGTG_14786
T08209_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGTT_14786
CCHC ZF
405
422
RNCYNCGKPGHVSAKCHQ
Links
Other
CCHC ZF
family RBPs
Other
Puccinia graminis
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PGTG_09249
Puccinia graminis
PGTG_09249
N
0.833
PGTG_01711
Puccinia graminis
PGTG_01711
N
0.833
PGTG_13387
Puccinia graminis
PGTG_13387
N
0.778
PGTG_08804
Puccinia graminis
PGTG_08804
N
0.778
PTTG_02229
Puccinia triticina
PTTG_02229
N
0.722