CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PTRG_02318
(
Pyrenophora tritici repentis
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
PTRG_02318
T08282_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTRT_02318
CCHC ZF
171
185
KVCFRCGETGHQARD
Links
Other
CCHC ZF
family RBPs
Other
Pyrenophora tritici repentis
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PTRG_12041
Pyrenophora tritici repentis
PTRG_12041
N
1.000
PTRG_12121
Pyrenophora tritici repentis
PTRG_12121
N
1.000
PTRG_11925
Pyrenophora tritici repentis
PTRG_11925
N
1.000
PTRG_10526
Pyrenophora tritici repentis
PTRG_10526
N
1.000
PTRG_05731
Pyrenophora tritici repentis
PTRG_05731
N
1.000
PTRG_09666
Pyrenophora tritici repentis
PTRG_09666
N
1.000
PTRG_03169
Pyrenophora tritici repentis
PTRG_03169
N
1.000