CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PTRG_12078
(
Pyrenophora tritici repentis
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
PTRG_12078
T08306_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTRT_12078
CCHC ZF
702
715
KLCFKCGKDDHQMR
Links
Other
CCHC ZF
family RBPs
Other
Pyrenophora tritici repentis
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PTRG_07180
Pyrenophora tritici repentis
PTRG_07180
N
1.000
PTRG_09586
Pyrenophora tritici repentis
PTRG_09586
N
1.000
PTRG_10522
Pyrenophora tritici repentis
PTRG_10522
N
1.000
PTRG_11774
Pyrenophora tritici repentis
PTRG_11774
N
1.000
PTRG_05998
Pyrenophora tritici repentis
PTRG_05998
N
1.000
PTRG_04983
Pyrenophora tritici repentis
PTRG_04983
N
1.000
PTRG_02305
Pyrenophora tritici repentis
PTRG_02305
N
1.000
PTRG_03396
Pyrenophora tritici repentis
PTRG_03396
N
1.000
PTRG_03515
Pyrenophora tritici repentis
PTRG_03515
N
1.000
PTRG_01672
Pyrenophora tritici repentis
PTRG_01672
N
1.000