CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PTTG_09785
(
Puccinia triticina
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
PTTG_09785
T08452_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTTG_09785T0
CCHC ZF
315
331
KCWQCGGENHYARNCPE
Links
Other
CCHC ZF
family RBPs
Other
Puccinia triticina
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PTTG_04953
Puccinia triticina
PTTG_04953
N
1.000
PTTG_09187
Puccinia triticina
PTTG_09187
N
0.941
PTTG_03411
Puccinia triticina
PTTG_03411
N
0.941
PTTG_09663
Puccinia triticina
PTTG_09663
N
0.882
PGTG_10787
Puccinia graminis
PGTG_10787
N
0.722