CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RO3G_02687
(
Rhizopus oryzae
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
RO3G_02687
T08516_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
RO3T_02686
CCHC ZF
290
307
VRCFGCQGYGHIKSECPT
Links
Other
CCHC ZF
family RBPs
Other
Rhizopus oryzae
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RO3G_17164
Rhizopus oryzae
RO3G_17164
N
0.778
fgenesh1_pg.C_scaffold_117000032
Capitella teleta
fgenesh1_pg.C_scaffold_117000032
N
0.722