CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
nasonia_NCBI_hmm159154
(
Nasonia vitripennis
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
nasonia_NCBI_hmm159154
T09014_0.6
DroSpeGe (2008-Jul-18)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
nasonia_NCBI_hmm159154
CCHC ZF
229
246
KVCYRCGVVGHQARECRS
Links
Other
CCHC ZF
family RBPs
Other
Nasonia vitripennis
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
nasonia_NCBI_hmm152304
Nasonia vitripennis
nasonia_NCBI_hmm152304
N
1.000
nasonia_NCBI_hmm460854
Nasonia vitripennis
nasonia_NCBI_hmm460854
N
1.000
nasonia_NCBI_hmm256354
Nasonia vitripennis
nasonia_NCBI_hmm256354
N
1.000
nasonia_NCBI_hmm172254
Nasonia vitripennis
nasonia_NCBI_hmm172254
N
0.944
nasonia_NCBI_hmm196254
Nasonia vitripennis
nasonia_NCBI_hmm196254
N
0.889