CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
nasonia_NCBI_hmm350544
(
Nasonia vitripennis
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
nasonia_NCBI_hmm350544
T09161_0.6
DroSpeGe (2008-Jul-18)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
nasonia_NCBI_hmm350544
CCHC ZF
128
145
TKCAICKEKGHWARECPT
Links
Other
CCHC ZF
family RBPs
Other
Nasonia vitripennis
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
nasonia_NCBI_hmm18454
Nasonia vitripennis
nasonia_NCBI_hmm18454
N
0.833
nasonia_NCBI_hmm302134
Nasonia vitripennis
nasonia_NCBI_hmm302134
N
0.833
nasonia_NCBI_hmm284604
Nasonia vitripennis
nasonia_NCBI_hmm284604
N
0.778
nasonia_NCBI_hmm132974
Nasonia vitripennis
nasonia_NCBI_hmm132974
N
0.778
TcIL3000.0.60500
Trypanosoma congolense
TcIL3000.0.60500
N
0.722
TcIL3000.0.47130
Trypanosoma congolense
TcIL3000.0.47130
N
0.722