CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
nasonia_NCBI_hmm80894
(
Nasonia vitripennis
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
nasonia_NCBI_hmm80894
T09226_0.6
DroSpeGe (2008-Jul-18)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
nasonia_NCBI_hmm80894
CCHC ZF
298
315
TKCFRCNKVGHKAADCPL
Links
Other
CCHC ZF
family RBPs
Other
Nasonia vitripennis
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
nasonia_NCBI_hmm312174
Nasonia vitripennis
nasonia_NCBI_hmm312174
N
0.778
nasonia_NCBI_hmm276124
Nasonia vitripennis
nasonia_NCBI_hmm276124
N
0.778
nasonia_NCBI_hmm274584
Nasonia vitripennis
nasonia_NCBI_hmm274584
N
0.778
nasonia_NCBI_hmm206094
Nasonia vitripennis
nasonia_NCBI_hmm206094
N
0.722