CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
nasonia_NCBI_hmm96174
(
Nasonia vitripennis
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
nasonia_NCBI_hmm96174
T09245_0.6
DroSpeGe (2008-Jul-18)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
nasonia_NCBI_hmm96174
CCHC ZF
231
248
AECHKCKKKGHIAKVCRS
Links
Other
CCHC ZF
family RBPs
Other
Nasonia vitripennis
RBPs
13 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
nasonia_NCBI_hmm266134
Nasonia vitripennis
nasonia_NCBI_hmm266134
N
1.000
nasonia_NCBI_hmm264134
Nasonia vitripennis
nasonia_NCBI_hmm264134
N
1.000
nasonia_NCBI_hmm136934
Nasonia vitripennis
nasonia_NCBI_hmm136934
N
1.000
nasonia_NCBI_hmm136874
Nasonia vitripennis
nasonia_NCBI_hmm136874
N
0.889
nasonia_NCBI_hmm92324
Nasonia vitripennis
nasonia_NCBI_hmm92324
N
0.889
nasonia_NCBI_hmm54874
Nasonia vitripennis
nasonia_NCBI_hmm54874
N
0.833
nasonia_NCBI_hmm160874
Nasonia vitripennis
nasonia_NCBI_hmm160874
N
0.833
nasonia_NCBI_hmm290174
Nasonia vitripennis
nasonia_NCBI_hmm290174
N
0.778
nasonia_NCBI_hmm82714
Nasonia vitripennis
nasonia_NCBI_hmm82714
N
0.778
nasonia_NCBI_hmm191094
Nasonia vitripennis
nasonia_NCBI_hmm191094
N
0.778
Aqu1.209597
Amphimedon queenslandica
Aqu1.209597
N
0.722
nasonia_NCBI_hmm110464
Nasonia vitripennis
nasonia_NCBI_hmm110464
N
0.722
Aqu1.204126
Amphimedon queenslandica
Aqu1.204126
N
0.722