AT2G06890 (Arabidopsis thaliana)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 AT2G06890-TAIR-G T09329_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AT2G06890.1-P CCHC ZF 157 174

Links

Other CCHC ZF family RBPs
Other Arabidopsis thaliana RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT5G31637 Arabidopsis thaliana AT5G31637-TAIR-G N 1.000
AT3G32895 Arabidopsis thaliana AT3G32895-TAIR-G N 0.944
AT5G31778 Arabidopsis thaliana AT5G31778-TAIR-G N 0.944
fgenesh1_pg.scaffold_4000219 Physcomitrella patens fgenesh1_pg.scaffold_4000219 N 0.722
RO3G_17164 Rhizopus oryzae RO3G_17164 N 0.722
fgenesh1_pg.scaffold_197000022 Physcomitrella patens fgenesh1_pg.scaffold_197000022 N 0.722
CBG05500 Caenorhabditis briggsae CBG05500 N 0.722
AT3G30833 Arabidopsis thaliana AT3G30833-TAIR-G N 0.722
CBG13752 Caenorhabditis briggsae CBG13752 N 0.722
PHUM519370 Pediculus humanus PHUM519370 N 0.722