AT3G42553 (Arabidopsis thaliana)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 AT3G42553-TAIR-G T09367_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AT3G42553.1-P CCHC ZF 250 267

Links

Other CCHC ZF family RBPs
Other Arabidopsis thaliana RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT1G36110 Arabidopsis thaliana AT1G36110-TAIR-G N 0.944
AT4G05592 Arabidopsis thaliana AT4G05592-TAIR-G N 0.944
AT3G29783 Arabidopsis thaliana AT3G29783-TAIR-G N 0.833
AT4G37705 Arabidopsis thaliana AT4G37705-TAIR-G N 0.833
AT4G07806 Arabidopsis thaliana AT4G07806-TAIR-G N 0.833
AT3G25450 Arabidopsis thaliana AT3G25450-TAIR-G N 0.833
AT5G28776 Arabidopsis thaliana AT5G28776-TAIR-G N 0.778
AT1G33813 Arabidopsis thaliana AT1G33813-TAIR-G N 0.778
AT1G17495 Arabidopsis thaliana AT1G17495-TAIR-G N 0.722
Genemark.8306_g Serpula lacrymans Genemark.8306_g N 0.722
AT2G05390 Arabidopsis thaliana AT2G05390-TAIR-G N 0.722