CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
BRADI1G43020
(
Brachypodium distachyon
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
BRADI1G43020
T09485_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI1G43020.1
CCHC ZF
58
75
FKCYNCGEKGHFSKECPN
Links
Other
CCHC ZF
family RBPs
Other
Brachypodium distachyon
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PGTG_20475
Puccinia graminis
PGTG_20475
N
0.722
PTTG_02009
Puccinia triticina
PTTG_02009
N
0.722
PGTG_18888
Puccinia graminis
PGTG_18888
N
0.722
PGTG_12770
Puccinia graminis
PGTG_12770
N
0.722
PGTG_08612
Puccinia graminis
PGTG_08612
N
0.722
PGTG_12398
Puccinia graminis
PGTG_12398
N
0.722
PGTG_07677
Puccinia graminis
PGTG_07677
N
0.722