CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
CJA24406
(
Caenorhabditis japonica
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
CJA24406
T09776_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA24406
CCHC ZF
467
484
VSCFYCGGKGHYSIKCPK
Links
Other
CCHC ZF
family RBPs
Other
Caenorhabditis japonica
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CJA20544
Caenorhabditis japonica
CJA20544
N
0.944
CJA19667
Caenorhabditis japonica
CJA19667
N
0.944
CJA03915
Caenorhabditis japonica
CJA03915
N
0.722
CJA26046
Caenorhabditis japonica
CJA26046
N
0.722