CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
CJA26568
(
Caenorhabditis japonica
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
CJA26568
T09786_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA26568
CCHC ZF
43
60
NQCFRCGGVGHVVFDFPT
Links
Other
CCHC ZF
family RBPs
Other
Caenorhabditis japonica
RBPs
18 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CJA22105
Caenorhabditis japonica
CJA22105
N
0.722
CJA21076
Caenorhabditis japonica
CJA21076
N
0.722
CJA19647
Caenorhabditis japonica
CJA19647
N
0.722
CJA23027
Caenorhabditis japonica
CJA23027
N
0.722
CJA23492
Caenorhabditis japonica
CJA23492
N
0.722
CJA25140
Caenorhabditis japonica
CJA25140
N
0.722
CJA24410
Caenorhabditis japonica
CJA24410
N
0.722
CJA24356
Caenorhabditis japonica
CJA24356
N
0.722
CJA18651
Caenorhabditis japonica
CJA18651
N
0.722
CJA17448
Caenorhabditis japonica
CJA17448
N
0.722
CJA03777
Caenorhabditis japonica
CJA03777
N
0.722
CJA02546
Caenorhabditis japonica
CJA02546
N
0.722
CJA00142
Caenorhabditis japonica
CJA00142
N
0.722
CJA05814
Caenorhabditis japonica
CJA05814
N
0.722
CJA10256
Caenorhabditis japonica
CJA10256
N
0.722
CJA17240
Caenorhabditis japonica
CJA17240
N
0.722
CJA13245
Caenorhabditis japonica
CJA13245
N
0.722
CJA27741
Caenorhabditis japonica
CJA27741
N
0.722