CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CRE21452
(
Caenorhabditis remanei
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
CRE21452
T09899_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE21452
CCHC ZF
649
666
VVCFRCNEQGHIAPNCPQ
Links
Other
CCHC ZF
family RBPs
Other
Caenorhabditis remanei
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CRE02995
Caenorhabditis remanei
CRE02995
N
1.000
CRE23634
Caenorhabditis remanei
CRE23634
N
1.000
CRE20843
Caenorhabditis remanei
CRE20843
N
1.000
CRE18272
Caenorhabditis remanei
CRE18272
N
1.000
CJA09252
Caenorhabditis japonica
CJA09252
N
0.778
CJA05578
Caenorhabditis japonica
CJA05578
N
0.778