CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSCHOG00000000883
(
Choloepus hoffmanni
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
ENSCHOG00000000883
T10019_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCHOP00000000788
CCHC ZF
10
27
DICYRCGESGHLAKDCDR
ENSCHOP00000000788
CCHC ZF
30
47
DACYNCSRGGHIAKDCKE
ENSCHOP00000000788
CCHC ZF
54
71
QCCYNCGKPGHLARDCDH
ENSCHOP00000000788
CCHC ZF
75
92
QKCYSCGEFGHIQKDCTK
ENSCHOP00000000788
CCHC ZF
93
110
VKCYRCGETGHVAINCSK
ENSCHOP00000000788
CCHC ZF
114
131
VNCYRCGESGHLARECTI
Links
Other
CCHC ZF
family RBPs
Other
Choloepus hoffmanni
RBPs
1 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CNBP
Homo sapiens
ENSG00000169714
N
0.852