CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZCCHC4
(
Oryctolagus cuniculus
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
ENSOCUG00000015990
T10354_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000013741
CCHC ZF
441
458
DGCFICGELGHKRSNCPN
ENSOCUP00000018839
CCHC ZF
447
464
DGCFICGELGHKRSNCPN
Links
Other
CCHC ZF
family RBPs
Other
Oryctolagus cuniculus
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ZCCHC4
Tupaia belangeri
ENSTBEG00000012685
N
0.944
ZCCHC4
Erinaceus europaeus
ENSEEUG00000008752
N
0.944
ZCCHC4
Tarsius syrichta
ENSTSYG00000000364
N
0.944
ZCCHC4
Sorex araneus
ENSSARG00000007999
N
0.944
Zcchc4
Mus musculus
ENSMUSG00000029179
N
0.889
ZCCHC4
Ochotona princeps
ENSOPRG00000005480
N
0.889
ZCCHC4
Procavia capensis
ENSPCAG00000002556
N
0.889
ZCCHC4
Macropus eugenii
ENSMEUG00000016660
N
0.833
Zcchc4
Rattus norvegicus
ENSRNOG00000029064
N
0.833