CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSOGAG00000013898
(
Otolemur garnettii
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
ENSOGAG00000013898
T10366_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000012446
CCHC ZF
4
21
NECFKCGRSGHWARECPT
ENSOGAP00000012446
CCHC ZF
52
68
DICYRCGESGHLAKDCD
ENSOGAP00000012446
CCHC ZF
72
89
DACYNCGRGGHIAKDCKE
ENSOGAP00000012446
CCHC ZF
96
113
QCCYNCGKPGHLARDCDH
ENSOGAP00000012446
CCHC ZF
117
134
QKCYSCGEFGHIQKDCTK
Links
Other
CCHC ZF
family RBPs
Other
Otolemur garnettii
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Cnbp
Mus musculus
ENSMUSG00000030057
N
1.000
CNBP
Canis familiaris
ENSCAFG00000004320
N
1.000