ZCCHC6 (Oryzias latipes)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 ENSORLG00000001714 T10384_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000002129 CCHC ZF 680 697
ENSORLP00000002129 CCHC ZF 1064 1081

Links

Other CCHC ZF family RBPs
Other Oryzias latipes RBPs

14 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ZCCHC6 Gasterosteus aculeatus ENSGACG00000004735 N 0.944
ZCCHC6 Equus caballus ENSECAG00000014831 N 0.917
ZCCHC6 Takifugu rubripes ENSTRUG00000000750 N 0.917
ZCCHC6 Anolis carolinensis ENSACAG00000000279 N 0.917
ZCCHC6 Tetraodon nigroviridis ENSTNIG00000015951 N 0.917
ZCCHC6 Myotis lucifugus ENSMLUG00000001298 N 0.889
ZCCHC6 Sorex araneus ENSSARG00000009763 N 0.889
ZCCHC6 Gallus gallus ENSGALG00000012607 N 0.889
ZCCHC11 Takifugu rubripes ENSTRUG00000000844 N 0.806
ZCCHC6 Oryctolagus cuniculus ENSOCUG00000010949 N 0.806
ZCCHC6 Danio rerio ENSDARG00000074645 N 0.778
zcchc11 Xenopus tropicalis ENSXETG00000008061 N 0.750
ZCCHC11 Tupaia belangeri ENSTBEG00000001230 N 0.722
ZCCHC11 Monodelphis domestica ENSMODG00000000618 N 0.722