LOC_Os05g16020 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os05g16020 T11390_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os05g16020.1 CCHC ZF 174 191

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

6 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os12g25220 Oryza sativa LOC_Os12g25220 N 0.722
LOC_Os04g03110 Oryza sativa LOC_Os04g03110 N 0.722
LOC_Os11g22910 Oryza sativa LOC_Os11g22910 N 0.722
LOC_Os10g09490 Oryza sativa LOC_Os10g09490 N 0.722
LOC_Os06g32820 Oryza sativa LOC_Os06g32820 N 0.722
LOC_Os05g17150 Oryza sativa LOC_Os05g17150 N 0.722