LOC_Os06g16850 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os06g16850 T11581_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os06g16850.1 CCHC ZF 100 117
LOC_Os06g16850.1 CCHC ZF 227 243
LOC_Os06g16850.1 CCHC ZF 299 316

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os10g17320 Oryza sativa LOC_Os10g17320 N 0.741
LOC_Os03g23190 Oryza sativa LOC_Os03g23190 N 0.727
LOC_Os05g17350 Oryza sativa LOC_Os05g17350 N 0.727
LOC_Os05g17280 Oryza sativa LOC_Os05g17280 N 0.727
LOC_Os09g14370 Oryza sativa LOC_Os09g14370 N 0.727
LOC_Os09g14330 Oryza sativa LOC_Os09g14330 N 0.727
LOC_Os07g25850 Oryza sativa LOC_Os07g25850 N 0.709
LOC_Os06g31670 Oryza sativa LOC_Os06g31670 N 0.709