Phatrdraft1453 (Phaeodactylum tricornutum)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 Phatrdraft1453 T12679_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Phatrdraft1453 CCHC ZF 365 382

Links

Other CCHC ZF family RBPs
Other Phaeodactylum tricornutum RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PHATRDRAFT_34423 Phaeodactylum tricornutum Phatr34423 N 1.000
LOC_Os07g20780 Oryza sativa LOC_Os07g20780 N 0.722
LOC_Os06g37935 Oryza sativa LOC_Os06g37935 N 0.722
LOC_Os07g22290 Oryza sativa LOC_Os07g22290 N 0.722
LOC_Os07g35440 Oryza sativa LOC_Os07g35440 N 0.722
LOC_Os08g11010 Oryza sativa LOC_Os08g11010 N 0.722
LOC_Os06g37908 Oryza sativa LOC_Os06g37908 N 0.722
LOC_Os07g24620 Oryza sativa LOC_Os07g24620 N 0.722
LOC_Os06g19330 Oryza sativa LOC_Os06g19330 N 0.722
LOC_Os04g06390 Oryza sativa LOC_Os04g06390 N 0.722
LOC_Os04g04860 Oryza sativa LOC_Os04g04860 N 0.722
LOC_Os03g33340 Oryza sativa LOC_Os03g33340 N 0.722
LOC_Os04g07480 Oryza sativa LOC_Os04g07480 N 0.722
LOC_Os05g17130 Oryza sativa LOC_Os05g17130 N 0.722
LOC_Os05g51990 Oryza sativa LOC_Os05g51990 N 0.722
LOC_Os05g26450 Oryza sativa LOC_Os05g26450 N 0.722
LOC_Os01g47960 Oryza sativa LOC_Os01g47960 N 0.722