POPTR_0010s08720 (Populus trichocarpa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 POPTR_0010s08720 T12730_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0010s08720.1 CCHC ZF 734 751

Links

Other CCHC ZF family RBPs
Other Populus trichocarpa RBPs

3 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
B9HKE9_POPTR Populus trichocarpa POPTR_0008s16240 N 0.944
PTTG_10798 Puccinia triticina PTTG_10798 N 0.722
EEB86834.1 Moniliophthora perniciosa EEB86834.1 N 0.722