SNAPOd2T00027516001 (Oikopleura dioica)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 SNAPOd2T00027516001 T13116_0.6 Genoscope (2013-Jan-11)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SNAPOd2T00027516001 CCHC ZF 145 162
SNAPOd2T00027516001 CCHC ZF 164 181
SNAPOd2T00027516001 CCHC ZF 232 249

Links

Other CCHC ZF family RBPs
Other Oikopleura dioica RBPs

5 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SNAPOd2T00018901001 Oikopleura dioica SNAPOd2T00018901001 N 0.963
SNAPOd2T00026452001 Oikopleura dioica SNAPOd2T00026452001 N 0.796
SNAPOd2T00020451001 Oikopleura dioica SNAPOd2T00020451001 N 0.796
SNAPOd2T00020450001 Oikopleura dioica SNAPOd2T00020450001 N 0.796
SNAPOd2T00018093001 Oikopleura dioica SNAPOd2T00018093001 N 0.796