Aqu1.202218 (Amphimedon queenslandica)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 Aqu1.202218 T13240_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Aqu1.202218 CCHC ZF 16 32

Links

Other CCHC ZF family RBPs
Other Amphimedon queenslandica RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Aqu1.205162 Amphimedon queenslandica Aqu1.205162 N 1.000
Aqu1.211578 Amphimedon queenslandica Aqu1.211578 N 1.000
Aqu1.226881 Amphimedon queenslandica Aqu1.226881 N 1.000
Aqu1.229739 Amphimedon queenslandica Aqu1.229739 N 1.000
Aqu1.205906 Amphimedon queenslandica Aqu1.205906 N 1.000
Aqu1.200899 Amphimedon queenslandica Aqu1.200899 N 1.000
Aqu1.209597 Amphimedon queenslandica Aqu1.209597 N 0.833
Aqu1.209265 Amphimedon queenslandica Aqu1.209265 N 0.722
Aqu1.205231 Amphimedon queenslandica Aqu1.205231 N 0.722
Aqu1.209054 Amphimedon queenslandica Aqu1.209054 N 0.706