Aqu1.214616 (Amphimedon queenslandica)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 Aqu1.214616 T13282_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Aqu1.214616 CCHC ZF 409 426

Links

Other CCHC ZF family RBPs
Other Amphimedon queenslandica RBPs

12 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Aqu1.204071 Amphimedon queenslandica Aqu1.204071 N 1.000
Aqu1.208306 Amphimedon queenslandica Aqu1.208306 N 0.944
Aqu1.216487 Amphimedon queenslandica Aqu1.216487 N 0.778
Genemark.7712_g Serpula lacrymans Genemark.7712_g N 0.722
Genemark.9847_g Serpula lacrymans Genemark.9847_g N 0.722
Genemark.6373_g Serpula lacrymans Genemark.6373_g N 0.722
Genemark.5251_g Serpula lacrymans Genemark.5251_g N 0.722
Genemark.1365_g Serpula lacrymans Genemark.1365_g N 0.722
Genemark.288_g Serpula lacrymans Genemark.288_g N 0.722
Genemark.3973_g Serpula lacrymans Genemark.3973_g N 0.722
Genemark.5223_g Serpula lacrymans Genemark.5223_g N 0.722
Genemark.6172_g Serpula lacrymans Genemark.6172_g N 0.722